MuSiC v0.4 is now available for download. This release adds new visualization tools, performance improvements, support for TCGA MAF v2.3, and coverage files in UCSC WIG format when BAMs are impractical. Here is a complete changelog:
- Added tools to generate typical visualizations like Kaplan-Meier survival estimates, and mutation status matrices.
- Support for TCGA Mutation Annotation Format (MAF) version 2.3.
- Performance improvements in mutation rate calculations, and more efficient memory usage.
- Added support for wiggle track format files describing coverage, if BAMs are unavailable.